Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839785.1_cds_XP_016507399.1_20526
CDS Infomation

[gene=LOC107825078] [db_xref=GeneID:107825078] [protein=uncharacterized protein LOC107825078 isoform X1] [protein_id=XP_016507399.1] [location=join(51365..51459,51542..51593,52825..52876,53015..53100,53738..54815,55766..55997,56868..57003,57361..57455,57552..57675,59823..59888)] [gbkey=CDS]
Sequence

ATGGAAAGCGTCACGCTTAAAGAAGAAGAGGCAGAAGAAGGTTTAGCAATTGCAGCTCTC
GGCTCTCTCTTCAAACTTACCGAAGTTTATCTTTCAGATTATTCGTCATGGCAAATGCAA
GAAGCGCAGATTTGTCTGGAATCTGCGAAACCAGTTCAGAATTCCGTTTTCTACAAAAAT
AATTCATCTCCATTAGATGAGTTTGGGTCTTTACCGGAAGACTTGGAGCTTATCAGACAA
ATGAATGAAATGGGACTCCCCATGACATTCCACACTAACAAGGAGAAGAGAAATCGAGCA
GTTCTGGGAAAAATAAAGAATGGAAAGAAGATGAGTCTTTGGTCCTGTGAGAATACTCAG
GATGAAGTGCTAAATTCAATACAAGAGCAGAAGGAAGAATGTGAGTCTAATGGTACTCTG
CAAGGCAACTCAAACAAGGTTTCTTCCTCCATGTCAATTCTTGGACAATGTGAATTCTCA
TCCTGCTATACCGAGGATGGTTTAGTCAGTTGTCTTAATGGTGGAGAAGAAAGTTTGAAC
AAATTGAGCGCTGGTTGTGCTCACATGTCCCTTGAATGCGCTGTTTGCAATCGGCAATCG
GATCTAAGTCTGGATAATGCAAAGGATACTGTCTCTACGTGTGAAAAAGTTCAATTGGAA
AAAGATGTAGTAGTAATGGTTGGCTCAAGTTTGGAATGCGGTAATAAAGCAGAAAGCTGT
CCAATCGATAGCAGTGTTGATAGTGGATGGATCAGTGGAGAGGGATTAAATGGTCATTGT
GAGAGAAATCCTTTAAATGGGGAGCAGATGGAGTATGGCTGTATTGGAAATCCTTTAAAT
GGAGAGCAAGTAGAATCTATTGCTATGCAAATGACTGAGCATCACACAGAAGATGGGCAA
TTCTGCAGTGATGTTGGTGAAGAGATACATAATTGTAATACAACTAGTAACAATTGTGAA
GAGACGATTAATGATTGGAGGTTGTATTGGGACAATGATTACCAAAGAAACTACTTTTAT
AATGTGATGACCATGCAATGTACATGGGATCCACCTCCAGGAATGGACGACCTAGTATTT
ACTAATTTTACTACCAAGCAACCAGAGATAGCACTTGAAACGGTGGTGTTGGAGGATGCA
GATTTAAAAGAATCTAATAATCTGCAAACTTCTGCAAGTATAAAATCTGACCTTGACATT
GCAGACAGATTTAGAGATGATGAGGTATTGTTGGACAGACAACTCAATGACTCAGAGGCG
ACAGGGCAATTTGCTGACAATTTTTGTAGTTTAAGCTCTACCAAACAGAAAAAGAGAGTT
AGGAAGACAAAATTCAAAGGGAAGTTATCAATAGAAAGTCAAGAGCTGCAATTCTGCGAT
ATTAATGAAGAACTATCTCCCAGTTTGAGCAAATATTGGTGCCAAAGGTATCTACTATTT
AACAAATATGATGAAGGAATACAGATGGACGAAGAAGGATGGTTCTCAGTTACGCCGGAG
GCCATAGCCAAGCATCATGCACTTCGCTGTGGTTCTGGTACTATAGTCGATCTCTTTACT
GGAGTTGGTGGAAATTCAATTCAGTTTGCTAAGAGGAGTAAACATGTCATTGCAATCGAT
ATTGATCCAAAGAAAATTGACTTTGCTCAGTATAATGCTGCCATTTATGGAGTCTGTGAC
CAAATAGACTTCATTAGAGGCGACTCTCTTGTTTTGGCTCCAAAGTTGAAGGCAGATGTA
GTCTTCATGTCACCACCTTGGGGGGGACCGGACTATTTGAAGGAAAGAACATTTGACATG
AAAACCATGCTTAGGCCGCATGATGGGAATTTTCTCTTCAGCATTGGCAGGGGAATTGCC
TCCAAAGTTGTTATGTTCCTTCCAAGAAATGTTGATATCAATCAGTTGGCAGAATTGTCA
TTATCCGTAAATCCACCGTGGTTATTAGAGGTGGAGAAGAATTACTTAAATGGCAAGTTG
AAAGCTGTTACAGCATACTTTTGTAAACCCTCCTGA

Peptide Sequence

PEP ID

XP_016507399.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107825078 isoform X1 [Nicotiana tabacum]
Sequence

MESVTLKEEEAEEGLAIAALGSLFKLTEVYLSDYSSWQMQEAQICLESAKPVQNSVFYKN
NSSPLDEFGSLPEDLELIRQMNEMGLPMTFHTNKEKRNRAVLGKIKNGKKMSLWSCENTQ
DEVLNSIQEQKEECESNGTLQGNSNKVSSSMSILGQCEFSSCYTEDGLVSCLNGGEESLN
KLSAGCAHMSLECAVCNRQSDLSLDNAKDTVSTCEKVQLEKDVVVMVGSSLECGNKAESC
PIDSSVDSGWISGEGLNGHCERNPLNGEQMEYGCIGNPLNGEQVESIAMQMTEHHTEDGQ
FCSDVGEEIHNCNTTSNNCEETINDWRLYWDNDYQRNYFYNVMTMQCTWDPPPGMDDLVF
TNFTTKQPEIALETVVLEDADLKESNNLQTSASIKSDLDIADRFRDDEVLLDRQLNDSEA
TGQFADNFCSLSSTKQKKRVRKTKFKGKLSIESQELQFCDINEELSPSLSKYWCQRYLLF
NKYDEGIQMDEEGWFSVTPEAIAKHHALRCGSGTIVDLFTGVGGNSIQFAKRSKHVIAID
IDPKKIDFAQYNAAIYGVCDQIDFIRGDSLVLAPKLKADVVFMSPPWGGPDYLKERTFDM
KTMLRPHDGNFLFSIGRGIASKVVMFLPRNVDINQLAELSLSVNPPWLLEVEKNYLNGKL
KAVTAYFCKPS

Transcript Sequence

Gene sequence data has not been registered.